BIO Pype#
A lightweight Python framework to organize, standardize and execute bioinformatics scripts and analyses.
The documentation is split into two parts:
- User Guide
Install and configure Bio_pype, pull workflows from the registry, run them, and monitor execution, including energy and carbon tracking.
- Developer Guide
Write your own snippets, pipelines and profiles, wire data between steps, and work with the validation, storage and queue internals.